loader
publication

Publications

Welcome to our research page featuring recent publications in the field of biostatistics and epidemiology! These fields play a crucial role in advancing our understanding of the causes, prevention, and treatment of various health conditions. Our team is dedicated to advancing the field through innovative studies and cutting-edge statistical analyses. On this page, you will find our collection of research publications describing the development of new statistical methods and their application to real-world data. Please feel free to contact us with any questions or comments.

Filter

Topic

History

Showing 10 of 116 publications

Measuring the performance of survival models to personalize treatment choices
Journal: Stat Med |
Year: 2025
The potential benefit of statin prescription based on prediction of treatment responsiveness in older individuals: An application to the PROSPER randomised controlled trial

Aims: Clinical guidelines often recommend treating individuals based on their cardiovascular risk. We revisit this paradigm and quantify the efficacy of three treatment strategies: (i) overall prescription, i.e. treatment to all individuals sharing the eligibility criteria of a trial; (ii) risk-stratified prescription, i.e. treatment only to those at an elevated outcome risk; and (iii) prescription based on predicted treatment responsiveness.

Methods and results: We reanalysed the PROSPER randomized controlled trial, which included individuals aged 70–82 years with a history of, or risk factors for, vascular diseases. We conducted the derivation and internal–external validation of a model predicting treatment responsiveness. We compared with placebo (n = 2913): (i) pravastatin (n = 2891); (ii) pravastatin in the presence of previous vascular diseases and placebo in the absence thereof (n = 2925); and (iii) pravastatin in the presence of a favourable prediction of treatment response and placebo in the absence thereof (n = 2890). We found an absolute difference in primary outcome events composed of coronary death, non-fatal myocardial infarction, and fatal or non-fatal stroke, per 10 000 person-years equal to: −78 events (95% CI, −144 to −12) when prescribing pravastatin to all participants; −66 events (95% CI, −114 to −18) when treating only individuals with an elevated vascular risk; and −103 events (95% CI, −162 to −44) when restricting pravastatin to individuals with a favourable prediction of treatment response.

Conclusion: Pravastatin prescription based on predicted responsiveness may have an encouraging potential for cardiovascular prevention. Further external validation of our results and clinical experiments are needed.

Journal: Eur J Prev Cardiol |
Year: 2023
Application of causal inference methods in individual-participant data meta-analyses in medicine: addressing data handling and reporting gaps with new proposed reporting guidelines

Observational data provide invaluable real-world information in medicine, but certain methodological considerations are required to derive causal estimates. In this systematic review, we evaluated the methodology and reporting quality of individual-level patient data meta-analyses (IPD-MAs) conducted with non-randomized exposures, published in 2009, 2014, and 2019 that sought to estimate a causal relationship in medicine. We screened over 16,000 titles and abstracts, reviewed 45 full-text articles out of the 167 deemed potentially eligible, and included 29 into the analysis. Unfortunately, we found that causal methodologies were rarely implemented, and reporting was generally poor across studies. Specifically, only three of the 29 articles used quasi-experimental methods, and no study used G-methods to adjust for time-varying confounding. To address these issues, we propose stronger collaborations between physicians and methodologists to ensure that causal methodologies are properly implemented in IPD-MAs. In addition, we put forward a suggested checklist of reporting guidelines for IPD-MAs that utilize causal methods. This checklist could improve reporting thereby potentially enhancing the quality and trustworthiness of IPD-MAs, which can be considered one of the most valuable sources of evidence for health policy.

Journal: BMC Med Res Methodol |
Year: 2024
Developing clinical prediction models: a step-by-step guide

Predicting future outcomes of patients is essential to clinical practice, with many prediction models published each year. Empirical evidence suggests that published studies often have severe methodological limitations, which undermine their usefulness. This article presents a step-by-step guide to help researchers develop and evaluate a clinical prediction model. The guide covers best practices in defining the aim and users, selecting data sources, addressing missing data, exploring alternative modelling options, and assessing model performance. The steps are illustrated using an example from relapsing-remitting multiple sclerosis. Comprehensive R code is also provided.

Journal: BMJ |
Year: 2024
Challenges in the Assessment of a Disease Model in the NICE Single Technology Appraisal of Tirzepatide for Treating Type 2 Diabetes: An External Assessment Group Perspective

The use of disease or multi-use models (i.e. one model that can be used to determine the cost effectiveness of many new technologies in a certain disease) is increasingly being advocated. Diabetes is a disease area where such models are relatively common; examples are the CORE Diabetes Model, which was used for National Institute for Health and Care Excellence (NICE) Guideline NG28, and the UK Prospective Diabetes Study (UKPDS) model. Recently, Eli Lilly has submitted a new diabetes model, the PRIME Type 2 Diabetes Model (PRIME T2D), to the NICE. This model was used in the NICE single technology appraisal (STA) process of tirzepatide (tradename Mounjaro®; Technology Appraisal 924). In this commentary we set out the key learnings from the External Assessment Group (EAG) perspective regarding this TA, the assessment of a disease model, and associated challenges.

Journal: PharmacoEconomics |
Year: 2024
Visualizing the target estimand in comparative effectiveness studies with multiple treatments

Aim: Comparative effectiveness research using real-world data often involves pairwise propensity score matching to adjust for confounding bias. We show that corresponding treatment effect estimates may have limited external validity, and propose two visualization tools to clarify the target estimand.

Materials & methods: We conduct a simulation study to demonstrate, with bivariate ellipses and joy plots, that differences in covariate distributions across treatment groups may affect the external validity of treatment effect estimates. We showcase how these visualization tools can facilitate the interpretation of target estimands in a case study comparing the effectiveness of teriflunomide (TERI), dimethyl fumarate (DMF) and natalizumab (NAT) on manual dexterity in patients with multiple sclerosis.

Results: In the simulation study, estimates of the treatment effect greatly differed depending on the target population. For example, when comparing treatment B with C, the estimated treatment effect (and respective standard error) varied from -0.27 (0.03) to -0.37 (0.04) in the type of patients initially receiving treatment B and C, respectively. Visualization of the matched samples revealed that covariate distributions vary for each comparison and cannot be used to target one common treatment effect for the three treatment comparisons. In the case study, the bivariate distribution of age and disease duration varied across the population of patients receiving TERI, DMF or NAT. Although results suggest that DMF and NAT improve manual dexterity at 1 year compared with TERI, the effectiveness of DMF versus NAT differs depending on which target estimand is used.

Conclusion: Visualization tools may help to clarify the target population in comparative effectiveness studies and resolve ambiguity about the interpretation of estimated treatment effects.

Journal: J Comp Eff Res |
Year: 2024
Evaluating individualized treatment effect predictions: A model‐based perspective on discrimination and calibration assessment

In recent years, there has been a growing interest in the prediction of individualized treatment effects. While there is a rapidly growing literature on the development of such models, there is little literature on the evaluation of their performance. In this paper, we aim to facilitate the validation of prediction models for individualized treatment effects. The estimands of interest are defined based on the potential outcomes framework, which facilitates a comparison of existing and novel measures. In particular, we examine existing measures of discrimination for benefit (variations of the c-for-benefit), and propose model-based extensions to the treatment effect setting for discrimination and calibration metrics that have a strong basis in outcome risk prediction. The main focus is on randomized trial data with binary endpoints and on models that provide individualized treatment effect predictions and potential outcome predictions. We use simulated data to provide insight into the characteristics of the examined discrimination and calibration statistics under consideration, and further illustrate all methods in a trial of acute ischemic stroke treatment. The results show that the proposed model-based statistics had the best characteristics in terms of bias and accuracy. While resampling methods adjusted for the optimism of performance estimates in the development data, they had a high variance across replications that limited their accuracy. Therefore, individualized treatment effect models are best validated in independent data. To aid implementation, a software implementation of the proposed methods was made available in R.

Journal: Stat Med |
Year: 2024
The use of imputation in clinical decision support systems: a cardiovascular risk management pilot vignette study among clinicians

Introduction: A major challenge of the use of prediction models in clinical care is missing data. Real-time imputation may alleviate this. However, to what extent clinicians accept this solution remains unknown. We aimed to assess acceptance of real-time imputation for missing patient data in a clinical decision support system (CDSS) including 10-year cardiovascular absolute risk for the individual patient.

Methods: We performed a vignette study extending an existing CDSS with the real-time imputation method Joint Modelling Imputation (JMI). We included 17 clinicians to use the CDSS with three different vignettes, describing potential use cases (missing data, no risk estimate; imputed values, risk estimate based on imputed data; complete information). In each vignette missing data was introduced to mimic a situation as could occur in clinical practice. Acceptance of end-users was assessed on three different axes: clinical realism, comfortableness and added clinical value.

Results: Overall, the imputed predictor values were found to be clinically reasonable and according to the expectations. However, for binary variables, use of a probability scale to express uncertainty was deemed inconvenient. The perceived comfortableness with imputed risk prediction was low and confidence intervals were deemed too wide for reliable decision making. The clinicians acknowledged added value for using JMI in clinical practice when used for educational, research or informative purposes.

Conclusion: Handling missing data in CDSS via JMI is useful, but more accurate imputations are needed to generate comfort in clinicians for use in routine care. Only then CDSS can create clinical value by improving decision making.

Journal: EHJ Digital Health |
Year: 2024
Network meta-analysis of MS DMTs

To the Editor: We recently became aware of the study by Chen et al. Notable differences in the 3-month confirmed disability progression (CDP3M) outcome in this analysis have been identified compared with previously published network meta-analysis (NMA). More specifically, the results for CDP3M greatly differ for interferon (IFN) beta-1A 30 mcg every week, IFN beta-1A 44 mcg 3 times a week, IFN beta-1A 22 mcg 3 times a week, natalizumab 300 mg every 4 weeks, and ocrelizumab 600 mg every 24 weeks. The published comparative estimates by Chen et al. may compromise the external validity of the SUCRA ranking results given that it is inconsistent with the totality of the existing body of published evidence. For example, the NMA of Chen et al. includes only one trial assessing the efficacy of natalizumab (where it was compared with placebo). Because there are no trials comparing natalizumab with other active treatments, the pooled effect estimate for natalizumab versus placebo (hazard ratio = 0.85) should remain similar to the treatment effect estimate from the original trial (hazard ratio = 0.58). However, this is not the case in the review of Chen et al. Similar discrepancies appear for ponesimod where the original trial reported a hazard ratio versus teriflunomide 14 mg of 0.83 (0.58; 1.18), whereas the NMA reported a hazard ratio of 1.39 (0.55; 3.57). Therefore, we respectfully request additional transparency from Chen et al. regarding the NMA methods and additional clarity supporting their results.

Journal: J Am Pharm Assoc |
Year: 2024